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TOPDOM: Conservatively Located Domains and Motifs in Proteins

List of proteins containing PF00905

MRDA_HAEIN
Peptidoglycan D,D-transpeptidase MrdA
Start
End
Sequence
279
618
GAVVVLDPKDSSVLAMVSTPSYDNNLFVDGISSEDYKRLLNDLARPLYSRATQGAYPPASTVKPFIAVAAQTENVITPNTTIFDPGYWVLPNSTKRFRDWKKTGHGDTDLNKAITESSDTYFYQVAYNMGIDRLSNWMKDFGFGMPTGIEIQEETAANIPTREWKQKRYKRPWVQGDTISVGIGQGYWTATPLQVAKATTILVNNGKVNTPHLMKAIEGAVLEPYEDPLLYPDINTPKVAAWEAAKRGMYNVVNAANGTGRKAFADANYRVAGKSGTAQVFSLKENEKYNTAGLKKELHDHAWFTAYAPYDNPKLVVTVILENAGGGSSNAAPLARKVM
UniProt Predicted topology
PBP1A_MYCS2
Penicillin-binding protein 1A
Start
End
Sequence
392
649
AVVSIDPRTGGIKAYYGGSDANGFDFAQAGLPTGSSFKVFALVAALQQGIGLGYQIDSGPLEVNGIKIGNVEGEGCGTCSIAEALKRSLNTSYYRLMLKLENGPADVAEAAHDAGVAESFPGVEHTLSEDGKGGPPNNGVVLGQYQSRVLDMASAYATLAASGVYHKPHFVEKVVNSSGQVLFDASKEDNGEERIDKAVADNVTSAMQPIAGWSRGHNLAGGRPSAAKTGTVQLGDTGDNRDAWMVGYTPSLSTAVW
UniProt Predicted topology
PBPA_CLOAB
Penicillin-binding protein 1A
Start
End
Sequence
382
663
AATLFDYHTGEIKAIVGGRGQQPPSSYNRADSSNYLRSVGSSIKPLTVYAPAIDTKLATEDTIVNDSPLSSDVAEKYGSNGVPYNPHNDDGGYSGPVNLKTALTKSINLVAIKLEDKLGLSTGAAYAQKFGLTLNNDDKSSIAALSLGEIRGSNTTTMAAAYGVFGNNGLYSEPRLYRKVVDKTGKVLLENNYSTRKVISPQSAYIMYDLLKGPVSAGGTGSYARFGDMPVAGKTGTASDSKNLWFCGLTPYYSAAVWVGNDQPTKLSLGSNDVAEIWGEI
UniProt Predicted topology
PBPA_BACSU
Penicillin-binding protein 1A/1B
Start
End
Sequence
352
640
GGVTLLDTKNGEVRAIGAGRNQPVGGFNYATQTKAQPGSTIKPILDYGPVIENKKWSTYEQIDDSAYTYSNGKPIRDWDRKYLGPISMRYALAQSRNIPALKAFQAVGKDTAVDFANGLGLGLTKDNVTEAYSIGGFGGNDGVSPLTMAGAYSAFGNNGTYNEPHFVKSIEFNDGTKLDLTPKSKSAMSDYTAFMITDMLKTAVKTGTGQLAQVPGVEVAGKTGTTNFDDNEVKRYNIASGGARDSWFVGYTPQYTAAVWTGMGENEAGKKSLSAEEQKVAKRIFAQL
UniProt Predicted topology
PBPA_CLOTE
Penicillin-binding protein 1A
Start
End
Sequence
364
621
SVSIVDYKTGNVKVLIGGRGKQPPLSFNRATEFYRAPGSTIKPLTVYGPAIDTKTSTAASSYNDAPVPEEIGKLYDKEPYNPKNSPNIYEGKMTLREALMKSKNVISVRIEHELGLKTGAEYGKKFGLTIDDSMDGTSMAALSLGQLSAKTGVSGTNTLGMAAAYGVFGNKGALSKPVVYKKVVDRTGKVLLENKYASSKVMSPEAAYILYDLLKGPVSYTPGATGMKANFGPMARGKTGTSNQSSDLWFAGLSPYY
UniProt Predicted topology
FTSI_BUCAP
Peptidoglycan D,D-transpeptidase FtsI
Start
End
Sequence
255
550
GIAILINIETGEILAMANSPSYNPNNMQYMINKNLRNKAITDIFEPGSTVKPIVIMEALKRGIIKKNSIINTKPYFIKKHKITDVAYHEKLNITGILKKSSNVGVSKIALSMNTSELINSYIKFGLGQPTNLGLIGEQKGFLPKKKKLSDLEKATFSFGYGLMITPLQLARLYTIIGSYGIYRPLSIIKIDHPLYEKRIFPKRYVKNVIHMMETVAHPGEGGSQAAIKGYRVAIKTGTAKKVGIHGYYIKKYIAYTAGIAPASNPKFSLTIIIDNPKGEKYYGGAVSAPVFSKIM
UniProt Predicted topology
FTSI_BUCAI
Peptidoglycan D,D-transpeptidase FtsI
Start
End
Sequence
258
553
GTAILINIKSGEVLAMANSPSYNPNNIRHIIQKNVRNKAITDLFEPGSTVKPIVIIEALKLGIIQENSIIDTKPFLIQKHQIKDVSYHEKLTITGILQKSSNVGVSKIALSMPTLKLLDSYIKFGLGKPTQLGLIGEKHGFFPPKKRWSNLDKATLSFGYGLMVTPLQLARLYSTIASYGIYRPLSIIKTDRPTGGKQIFPPKYVKKVINMMESVSQPGGGGLQAAVRGYRVAVKTGTAKKVGIHGRYIKKYTAYTAGIAPASDPRFSLIIILDNPQGKKYYGGAVSAPVFSNIM
UniProt Predicted topology
PBP_STAAU
Beta-lactam-inducible penicillin-binding protein
Start
End
Sequence
348
659
SGTAIHPQTGELLALVSTPSYDVYPFMYGMSNEEYNKLTEDKKEPLLNKFQITTSPGSTQKILTAMIGLNNKTLDDKTSYKIDGKGWQKDKSWGGYNVTRYEVVNGNIDLKQAIESSDNIFFARVALELGSKKFEKGMKKLGVGEDIPSDYPFYNAQISNKNLDNEILLADSGYGQGEILINPVQILSIYSALENNGNINAPHLLKDTKNKVWKKNIISKENINLLNDGMQQVVNKTHKEDIYRSYANLIGKSGTAELKMKQGETGRQIGWFISYDKDNPNMMMAINVKDVQDKGMASYNAKISGKVYDEL
UniProt Predicted topology
Counters
Visitors 739144
CATH-Gene3D 1392
NCBIfam 586
PANTHER 1754
Pfam 2780
PRINTS 774
ProSite profiles 578
SMART 594
SUPERFAMILY 639
Inside 7417
Outside 1678
Transmem 1627
All 9097
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