TOPDOM: Conservatively Located Domains and Motifs in Proteins
List of proteins containing PF00905
PBPF_BACSU
Penicillin-binding protein 1F
Start
End
Sequence
322
594
GSAVFINNKTGGVEAAIGGRDYTSKGYNRVTAVRQPGSTFKPLAVYGPAMQEKKFKPYSLLKDELQSYGDYTPKNYDSRYEGEVTMSDAITYSKNAPAVWTLNEIGVETGKSYLKANGIDIPDEGLALALGGLEKGVSPLQLAGAFHTFAANGTYTEPFFISSIIDEDGETIADHKEEGKRVFSKQTSWNMTRMLQQVVKKGTATSGTYHGDLAGKTGSTSYTGVSGATKDAWFAGYTPKITGAVWMGYDKTDQNHYLKAGSSYPTRLFKDI
PBPA_CLOP1
Penicillin-binding protein 1A
Start
End
Sequence
379
662
SATIIDYKTGHVKALVGGRGEQPAMSHNRAYYDLKSIGSATKPLTVYGPAIDLGLGGAGSVVNDSPLSNKELSSTGYKDQPKNEYNSYRGPLTFREAIKISSNLAAIKVANEVGVSNSIAYGEKLGLVYGPHSRGISTTALGQFQNDPNNPDGGNTYTLASAFGVFGNNGVKTNAKLYTKVLDSHGNVILDTSTPEETKIFSPQASYIVYDMLKDQVESGSAKPAKFGNIPVAGKTGTTTGDKDYLFAGLTPYYSAAIWIGYDKPREMRTSSGTVTSPIFGKI
PBPA_STRPN
Penicillin-binding protein 1A
Start
End
Sequence
332
622
TIVDVSNGKVIAQLGARHQSSNVSFGINQAVETNRDWGSTMKPITDYAPALEYGVYDSTATIVHDEPYNYPGTNTPVYNWDRGYFGNITLQYALQQSRNVPAVETLNKVGLNRAKTFLNGLGIDYPSIHYSNAISSNTTESDKKYGASSEKMAAAYAAFANGGTYYKPMYIHKVVFSDGSEKEFSNVGTRAMKETTAYMMTDMMKTVLTYGTGRNAYLAWLPQAGKTGTSNYTDEEIENHIKTSQFVAPDELFAGYTRKYSMAVWTGYSNRLTPLVGNGLTVAAKVYRSM
PBPA_STRR6
Penicillin-binding protein 1A
Start
End
Sequence
332
622
TIVDVSNGKVIAQLGARHQSSNVSFGINQAVETNRDWGSTMKPITDYAPALEYGVYESTATIVHDEPYNYPGTNTPVYNWDRGYFGNITLQYALQQSRNVPAVETLNKVGLNRAKTFLNGLGIDYPSIHYSNAISSNTTESDKKYGASSEKMAAAYAAFANGGTYYKPMYIHKVVFSDGSEKEFSNVGTRAMKETTAYMMTDMMKTVLSYGTGRNAYLAWLPQAGKTGTSNYTDEEIENHIKTSQFVAPDELFAGYTRKYSMAVWTGYSNRLTPLVGNGLTVAAKVYRSM
PBPA_CLOBL
Penicillin-binding protein 1A
Start
End
Sequence
358
620
SAVIMDYHNGEVKTIVGGRGDQPARSYNRAASYNYLRPAGSSIKPLTVYSAAIDSKKATAATGFEDSPIPNNIGRKYSSGAPYNPRNTPDIYYGYVNVREALMRSINVVAVKLVDKIGLNTSIQYAEKFGIPIDQHDRSSIASLSLGELHKGTNPLIMAQAYGVFGNNGTYTEAKLYTKVVDRTGKVLLEPKTNTKKVLSPEAAFITYDMLQGPVSESGTGPQANFGNMEVRGKTGTSSDMKNLWFCGLTPYYSAAVWIGND
PBP2A_STRP2
Penicillin-binding protein 2a
Start
End
Sequence
371
647
VALEPKTGGVRGVVGQVADNDKTGFRNFNYATQSKRSPGSTIKPLVVYTPAVEAGWALNKQLDNHTMQYDSYKVDNYAGIKTSREVPMYQSLAESLNLPAVATVNDLGVDKAFEAGEKFGLNMEKVDRVLGVALGSGVETNPLQMAQAYAAFANEGLMPEAHFISRIENASGQVIASHKNSQKRVIDKSVADKMTSMMLGTFTNGTGISSSPADYVMAGKTGTTEAVFNPEYTSDQWVIGYTPDVVISHWLGFPTTDENHYLAGSTSNGAAHVFRN
PBPB_MYCTU
Penicillin-binding protein PbpB
Start
End
Sequence
339
654
SAVVLDAKTGEVLAMANDNTFDPSQDIGRQGDKQLGNPAVSSPFEPGSVNKIVAASAVIEHGLSSPDEVLQVPGSIQMGGVTVHDAWEHGVMPYTTTGVFGKSSNVGTLMLSQRVGPERYYDMLRKFGLGQRTGVGLPGESAGLVPPIDQWSGSTFANLPIGQGLSMTLLQMTGMYQAIANDGVRVPPRIIKATVAPDGSRTEEPRPDDIRVVSAQTAQTVRQMLRAVVQRDPMGYQQGTGPTAGVPGYQMAGKTGTAQQINPGCGCYFDDVYWITFAGIATADNPRYVIGIMLDNPARNSDGAPGHSAAPLFHN
PBP2_STRP2
Penicillin-binding protein 2B
Start
End
Sequence
344
670
YAVALNPKTGAVLSMSGIKHDLKTGELTPDSLGTVTNVFVPGSVVKAATISSGWENGVLSGNQTLTDQSIVFQGSAPINSWYTQAYGSFPITAVQALEYSSNTYMVQTALGLMGQTYQPNMFVGTSNLESAMEKLRSTFGEYGLGTATGIDLPDESTGFVPKEYSFANYITNAFGQFDNYTPMQLAQYVATIANNGVRVAPRIVEGIYGNNDKGGLGDLIQQLQPTEMNKVNISDSDMSILHQGFYQVAHGTSGLTTGRAFSNGALVSISGKTGTAESYVADGQQATNTNAVAYAPSDNPQIAVAVVFPHNTNLTNGVGPSIARDI
PBPA_CLOB1
Penicillin-binding protein 1A
Start
End
Sequence
358
620
SAVIMDYHNGEVKTIIGGRGDQPARSYNRAASYNYLRPAGSSIKPLTVYSAAIDSKKATAATGFEDSPIPNNIGRKYSSGAPYNPKNSPDIYYGYVNVREALMRSINVVAVKLVDKIGLNTSIQYAEKFGIPIDQHDRSSIASLSLGELHKGTNPLIMAQAYGVFGNNGTYTEAKLYTKVVDRTGKVLLEPKTNTKKVLSPEAAFITYDMLQGPVSESGTGPQANFGNMEVRGKTGTSSDMKNLWFCGLTPYYSAAVWIGND
PBPA_CLOPS
Penicillin-binding protein 1A
Start
End
Sequence
379
662
SATIIDYKTGHVKALVGGRGEQPAMSHNRAYYDLKSIGSATKPLTVYGPAIDLGLGGAGSVVNDSPLTNKELSSTGYKDQPKNEYNSYRGPLTFREAIKISSNLAAIKVANEVGVSNSIAYGEKLGLVYGPHSRGISTTALGQFQNDPNNPDGGNTYTLASAFGVFGNNGVKTNAKLYTKVLDSHGNVLLDTSTPEEIKIFSPQTSYIVYDMLKDQVESGSAKPAKFGNIPVAGKTGTTTGDKDYLFAGLTPYYSAAIWIGYDKPREMRTSSGIVTSPIFGKI
Counters
| Visitors | 739144 |
|---|---|
| CATH-Gene3D | 1392 |
| NCBIfam | 586 |
| PANTHER | 1754 |
| Pfam | 2780 |
| PRINTS | 774 |
| ProSite profiles | 578 |
| SMART | 594 |
| SUPERFAMILY | 639 |
| Inside | 7417 |
| Outside | 1678 |
| Transmem | 1627 |
| All | 9097 |