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TOPDOM: Conservatively Located Domains and Motifs in Proteins

List of proteins containing PR00011

USH2A_MOUSE
Usherin
Start
End
Sequence
858
876
CDKSTGQCPCKLGVTGLR
UniProt Predicted topology
USH2A_MOUSE
Usherin
Start
End
Sequence
756
774
CDPLSGQCACKKEAKGLK
UniProt Predicted topology
USH2A_MOUSE
Usherin
Start
End
Sequence
775
803
DSCRENFYGLPWSACEVCDCSKAGSQPG
UniProt Predicted topology
USH2A_MOUSE
Usherin
Start
End
Sequence
705
723
CHQNSGQCSCKANVIGLR
UniProt Predicted topology
LAM3_CAEEL
Laminin subunit alpha lam-3
Start
End
Sequence
953
971
CSEENGECECKENYIGAQ
UniProt Not transmembrane protein
LAM3_CAEEL
Laminin subunit alpha lam-3
Start
End
Sequence
1098
1116
CNLVTGQCVCKPGVTGLK
UniProt Not transmembrane protein
LAM3_CAEEL
Laminin subunit alpha lam-3
Start
End
Sequence
1019
1047
DQCRPSYFNFTDAGCQFCHCNIYGSIED
UniProt Not transmembrane protein
LAM3_CAEEL
Laminin subunit alpha lam-3
Start
End
Sequence
1000
1018
CDQVSGQCNCKQGVFGKQ
UniProt Not transmembrane protein
CED1_CAEEL
Cell death abnormality protein 1
Start
End
Sequence
697
715
CDPTTGECICEPGYHGKT
UniProt Predicted topology
CED1_CAEEL
Cell death abnormality protein 1
Start
End
Sequence
568
586
CDKETGECTCQPGFFGSD
UniProt Predicted topology
Counters
Visitors 757038
CATH-Gene3D 1392
NCBIfam 586
PANTHER 1754
Pfam 2780
PRINTS 774
ProSite profiles 578
SMART 594
SUPERFAMILY 639
Inside 7417
Outside 1678
Transmem 1627
All 9097
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